几天前,我已经将R(从3.6升级到4.0)和RStudio(从1.1升级到1.2.5),昨天将Ubuntu从18.04升级到20.04。
Since then, R sometimes never terminates when executing certain commands: ivreg
(from package AER
), summary
(of a logit regression) and logitmfx
(from package mfx
). Sometimes these commands run fine, but most of the time I have to kill the process (killall rstudio
) because R won't terminate the execution, even when pressing the red Stop button in RStudio.
When I tried example('AER')
, it worked fine. Then I re-installed the package AER
. It threw 10 warnings of type In readLines(file, skipNul = TRUE) : cannot open compressed file '/usr/lib/R/site-library/[package]/DESCRIPTION', probable reason 'No such file or directory'
where [package]
is abind
, colorspace
, dichromat
... (but not AER
).
Since then example('AER')
throws a warning: no help found for ‘AER’
.
I've removed and reinstalled R 4.0: it didn't help. Besides, the apt purge r-base* r-recommended r-cran-*
threw a warning: dpkg: warning: while removing r-base-core, directory '/usr/lib/R/site-library' not empty so not removed
. Also, there was a bunch of Package [package] is not installed, so not removed
, including for [package]
equal to r-cran-abind
and the other listed above (this purge
also returned a bunch of Note, selecting [package] for glob 'r-cran-*'
).
我没有在没有RStudio的情况下尝试使用R。在升级到Ubuntu 20.04时,我可能正在RStudio上工作。另外,我不记得是在升级R和RStudio之后(这是我的最佳猜测)还是在升级Ubuntu(一两天之后)之后开始出现此问题。
我希望有人能帮帮忙。